The detailed information of tRNA gene sequence


Sequence ID>WENV180074692
Genome IDMPMA02160635
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 18979
End posion on genome 19068
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcgtcggt
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCCTCCGGGTCA
CCATGGGTTCAAATCCCATACCTTCCGCCA
Downstream region at tRNA end position 
agtcgatgac
Secondary structure (Cloverleaf model)
>WENV180074692	Ser	CGA
                   t      GCCA agtcgatgac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T A C C C     A
      C G A        G      | | | | |     A
    G       G A C C       A T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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