The detailed information of tRNA gene sequence


Sequence ID>WENV180074766
Genome IDMPMA02165678
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 446
End posion on genome 355
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagcgcaatc
tRNA gene sequence 
GGAGGGATCGCATAGTGGTCTAGTGCGGCCGCCTGCTAAGCGGTTAGGGGGCGAAATCCC
CCTCATGGGTTCGAATCCCATTCCCTCCGCCA
Downstream region at tRNA end position 
cccgttcggc
Secondary structure (Cloverleaf model)
>WENV180074766	Ser	GCT
                   c      GCCA cccgttcggc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       A T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TAGGGGGCGAAATCCCCCTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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