The detailed information of tRNA gene sequence


Sequence ID>WENV180074865
Genome IDMPMA02173335
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 605
End posion on genome 511
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccataaattt
tRNA gene sequence 
GGAAGCGAATGTGACCCTGGTGGGCACCACAGCCTTCAAAGCTGATGTCTCGGGTTAAAC
CGAGAGGTGGGTTCGATTCCCACGCGTTTCCGCCA
Downstream region at tRNA end position 
attaagagaa
Secondary structure (Cloverleaf model)
>WENV180074865	SeC	TCA
                   t      GCCA attaagagaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     A   G          T T
                    A     C A C C C     A
      C C C        T      | | | | |     G
    T       A G T G       G T G G G     C
    G         | | |                 T T
    G       G C A C
      T G G        C     TGTCTCGGGTTAAACCGAGAG
                    A   A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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