The detailed information of tRNA gene sequence


Sequence ID>WENV180074920
Genome IDMPMA02176838
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2404
End posion on genome 2317
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcaaagatca
tRNA gene sequence 
GGAGGCGTGGCAGAGCGGTTGAATGCACTGGTCTTGAAAACCAGCAAGGGTTTACGCCCT
TCAGAGGTTCGAATCCTCTCGCCTCCGCta
Downstream region at tRNA end position 
tcaaaatttc
Secondary structure (Cloverleaf model)
>WENV180074920	Ser	TGA
                   a      GCta tcaaaatttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      | | | | |     G
    G       G A C G       A G A G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAAGGGTTTACGCCCTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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