The detailed information of tRNA gene sequence


Sequence ID>WENV180075004
Genome IDMPMA02181953
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 10814
End posion on genome 10721
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccattattat
tRNA gene sequence 
GGAAGGATGGGTGAGTTGGTTTAAACCAGGAGTTTGCTAAACTTCCGTAGGTTATAATGA
CCTACCGAGGGTTCGAATCCCTCTCCTTCCGCCA
Downstream region at tRNA end position 
caaaaactaa
Secondary structure (Cloverleaf model)
>WENV180075004	Ser	GCT
                   t      GCCA caaaaactaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTAGGTTATAATGACCTACC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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