The detailed information of tRNA gene sequence


Sequence ID>WENV180075061
Genome IDMPMA02185441
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 27374
End posion on genome 27287
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaaatatag
tRNA gene sequence 
GGAGAGATGACTGAGTGGCTTAAGGTGGCGGTCTTGAAAACCGTTGTGGGTTCATACCCA
CCGTGGGTTCGAATCCCACTCTCTCCGCat
Downstream region at tRNA end position 
ggaaataatt
Secondary structure (Cloverleaf model)
>WENV180075061	Ser	TGA
                   g      GCat ggaaataatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C A       G T G G G     C
    G         + | |                 T T
    C       A G G T
      T T A        G     TGTGGGTTCATACCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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