The detailed information of tRNA gene sequence


Sequence ID>WENV180075130
Genome IDMPMA02189886
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 13330
End posion on genome 13422
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccgccaagt
tRNA gene sequence 
GGAGAGGTGGCTGAGTCCGGTTTAAGGCACACGATTCGAAATCGTGCGTAGGCTTATACC
CTACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtggtcgatt
Secondary structure (Cloverleaf model)
>WENV180075130	Ser	CGA
                   t      GCCA gtggtcgatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    T T T A        A     CGTAGGCTTATACCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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