The detailed information of tRNA gene sequence


Sequence ID>WENV180075155
Genome IDMPMA02191345
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 790
End posion on genome 879
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataatagaaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCTTGGAAAGTGTGTGTACCCTCACAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
acaacgcnnn
Secondary structure (Cloverleaf model)
>WENV180075155	Ser	GGA
                   a      GCCA acaacgcnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTACCCTCACAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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