The detailed information of tRNA gene sequence


Sequence ID>WENV180075197
Genome IDMPMA02194351
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 86188
End posion on genome 86265
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcttgctcgc
tRNA gene sequence 
AGGAGCGTAGCTCAGCCTGGCCAGAGCGCTGGTCTCCAAAACCAGTGGTCGGGGGTTCGA
ATCCTCCCGCTCCTGCCA
Downstream region at tRNA end position 
attttcgaag
Secondary structure (Cloverleaf model)
>WENV180075197	Trp	CCA
                   c      GCCA attttcgaag
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
    C C G A        A      | | + | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          G     TGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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