The detailed information of tRNA gene sequence


Sequence ID>WENV180075435
Genome IDMPMA02209075
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1266
End posion on genome 1342
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttatttctat
tRNA gene sequence 
GCCACGGTAGCTCAGTTGGTTAGAGCACGGGACTCATAAGCCCGGTGTCGTTGGTTCAAT
TCCAGCCCGTGGCACCA
Downstream region at tRNA end position 
ttcggcaagc
Secondary structure (Cloverleaf model)
>WENV180075435	Met	CAT
                   t      ACCA ttcggcaagc
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C
                     G - C          T T
                    T     C G A C C     A
      T G A        A      | + | | |     A
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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