The detailed information of tRNA gene sequence


Sequence ID>WENV180075562
Genome IDMPMA02218176
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 5908
End posion on genome 5816
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catttgacac
tRNA gene sequence 
GGAGAGATGGGTGAGTTGGTTTAAACCAGTCGTTTGCTAAATGACCGTACGTGGAAACAT
GTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aacactattt
Secondary structure (Cloverleaf model)
>WENV180075562	Ser	GCT
                   c      GCCA aacactattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTACGTGGAAACATGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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