The detailed information of tRNA gene sequence


Sequence ID>WENV180075586
Genome IDMPMA02219773
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 238
End posion on genome 333
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gataatccgt
tRNA gene sequence 
GGAAGAGGATCGCACCCCGGTGGGGCGCCCGGTCTTCAAAACCGGTGAGGGGCGCCAAGC
GTGCCTGGTGGGTTCGACTCCCACCCTCTTCCGCCA
Downstream region at tRNA end position 
attccccaac
Secondary structure (Cloverleaf model)
>WENV180075586	SeC	TCA
                   t      GCCA attccccaac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    C       A C G C       G T G G G     C
    G         | | |                 T T
    G       G G C G
      T G G        C     TGAGGGGCGCCAAGCGTGCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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