The detailed information of tRNA gene sequence


Sequence ID>WENV180075671
Genome IDMPMA02225414
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 601
End posion on genome 512
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacctgactt
tRNA gene sequence 
GGAGGGGTGGCCGAGCGGTTTAAGGCGCCTGTCTTGAAAACAGGTTTACCGGCAACGGTA
ACGCAGGTTCGAATCCTGTCCCCTCCGCCA
Downstream region at tRNA end position 
gttgaaagtt
Secondary structure (Cloverleaf model)
>WENV180075671	Ser	TGA
                   t      GCCA gttgaaagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTTACCGGCAACGGTAAC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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