The detailed information of tRNA gene sequence


Sequence ID>WENV180075687
Genome IDMPMA02226618
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1289
End posion on genome 1379
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgtgctcac
tRNA gene sequence 
GGAGGGGTCGCATAGTGGCCTAGTGCGGGCGCCTGCTAAGCGCTTAGGGGGCGAAATCCC
TCTCGCGGGTTCGAATCCCGCCCCCTCCGCCg
Downstream region at tRNA end position 
gcttgttaca
Secondary structure (Cloverleaf model)
>WENV180075687	Ser	GCT
                   c      GCCg gcttgttaca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TAGGGGGCGAAATCCCTCTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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