The detailed information of tRNA gene sequence


Sequence ID>WENV180075717
Genome IDMPMA02228805
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 197
End posion on genome 273
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttgcatattc
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCGCTTGCTTCACACGTAAGAGGTCGGAGGTTCGAG
TCCCCCATCGCCCACCA
Downstream region at tRNA end position 
gcaggtctat
Secondary structure (Cloverleaf model)
>WENV180075717	Val	CAC
                   c      ACCA gcaggtctat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     C C C C C     A
      T G A        A      | |   | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G + T
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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