The detailed information of tRNA gene sequence


Sequence ID>WENV180075781
Genome IDMPMA02234305
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 433
End posion on genome 525
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaaattgtt
tRNA gene sequence 
GGAGGCGTGGGAGAGTTGGTTTAATCCAGCAGTTTGCTAAATTGCCGTACGGTTAATTCC
GTACCGTTGGTTCGAATCCAACCGCCTCCGCCA
Downstream region at tRNA end position 
caagttatct
Secondary structure (Cloverleaf model)
>WENV180075781	Ser	GCT
                   t      GCCA caagttatct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A A C C     A
    T T G A        G      | | | | |     G
  G         G A G G       G T T G G     C
  G           | | |                 T T
  T         A T C C
    T T A          A     CGTACGGTTAATTCCGTACC
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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