The detailed information of tRNA gene sequence


Sequence ID>WENV180075928
Genome IDMPMA02244807
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 487
End posion on genome 578
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatacacacc
tRNA gene sequence 
GGAGGGGTCGCATAGAGGCCTAGTGCGGGCGCCTGCTAAGCGCTTACCGGTGGTGACATC
GGTCGAGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
caagcttccg
Secondary structure (Cloverleaf model)
>WENV180075928	Ser	GCT
                   c      GCCA caagcttccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TACCGGTGGTGACATCGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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