The detailed information of tRNA gene sequence


Sequence ID>WENV180075970
Genome IDMPMA02248104
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 11629
End posion on genome 11717
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gggagcccgt
tRNA gene sequence 
GGAGGGGTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAACCGTTGTGCGCTTTGCGTAC
CGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ctacttcttg
Secondary structure (Cloverleaf model)
>WENV180075970	Ser	CGA
                   t      GCCA ctacttcttg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGCGCTTTGCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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