The detailed information of tRNA gene sequence


Sequence ID>WENV180076072
Genome IDMPMA02256062
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 5664
End posion on genome 5740
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taccggctcg
tRNA gene sequence 
GGGCGCATAGCTCAGTTGGTTAGAGCGCTGTGTTCACATCGCAGAGGTCCCTGGTTCGAA
TCCAGGTGCGCCCACCA
Downstream region at tRNA end position 
tttttctgca
Secondary structure (Cloverleaf model)
>WENV180076072	Val	CAC
                   g      ACCA tttttctgca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          T A
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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