The detailed information of tRNA gene sequence


Sequence ID>WENV180076142
Genome IDMPMA02260385
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 491
End posion on genome 399
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaactaatat
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATGCGGTTTAACACC
GTATCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
attcctttat
Secondary structure (Cloverleaf model)
>WENV180076142	Ser	GCT
                   t      GCCA attcctttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGTTTAACACCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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