The detailed information of tRNA gene sequence


Sequence ID>WENV180076169
Genome IDMPMA02262368
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 7276
End posion on genome 7365
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcgccccaac
tRNA gene sequence 
GGAAGGGTGCCGGAGTGGTCGAACGGGGCGCTCTCGAAAAGCGTTGTGCGAGCAATCGCA
CCGGGGGTTCGAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
tccttcatca
Secondary structure (Cloverleaf model)
>WENV180076169	Ser	CGA
                   c      GCCA tccttcatca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGCGAGCAATCGCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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