The detailed information of tRNA gene sequence


Sequence ID>WENV180076191
Genome IDMPMA02263973
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 8211
End posion on genome 8301
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctcgtttcat
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGGGCGCCTCGAAAGCGTCTTGTCGGGTAACCGG
CACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttttattttc
Secondary structure (Cloverleaf model)
>WENV180076191	Ser	CGA
                   t      GCCA ttttattttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGTCGGGTAACCGGCAC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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