The detailed information of tRNA gene sequence


Sequence ID>WENV180076237
Genome IDMPMA02267078
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 17207
End posion on genome 17296
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gataatactt
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTTAAGGTGCTCGCTTGGAAAGCGAGTGAGGGTTAACGCCCT
CCACGGGTTCGAATCCCGTCCTCTCCGCCA
Downstream region at tRNA end position 
attttcactt
Secondary structure (Cloverleaf model)
>WENV180076237	Ser	GGA
                   t      GCCA attttcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       G T C G       A C G G G     C
    G         + | +                 T T
    T       A G G T
      T T A        G     TGAGGGTTAACGCCCTCC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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