The detailed information of tRNA gene sequence


Sequence ID>WENV180076328
Genome IDMPMA02273916
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 619
End posion on genome 527
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtaatcaac
tRNA gene sequence 
GGAAAGGTGGGTGAGCTGGTTTAAACCAACGGGTTGCTAACTCGTCGTACGTCGAAAGAT
GTACCGAGGGTTCGAATCCCTCCCTTTCCGCCA
Downstream region at tRNA end position 
ttatttgtat
Secondary structure (Cloverleaf model)
>WENV180076328	Ser	GCT
                   c      GCCA ttatttgtat
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTACGTCGAAAGATGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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