The detailed information of tRNA gene sequence


Sequence ID>WENV180076346
Genome IDMPMA02275161
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 53
End posion on genome 141
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatgaatatt
tRNA gene sequence 
GGAGAGGTGGCTCGAGTGGTTGAAGGCGGCTGTCTTGAAAACAGCTAAGGGGGAAACTCC
TTCGAGGGTTCGAATCCCTCCCTCTCCGCaa
Downstream region at tRNA end position 
cttgacattt
Secondary structure (Cloverleaf model)
>WENV180076346	Ser	TGA
                   t      GCaa cttgacattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T G A G        G      | | | | |     G
  G         C T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    T G A          G     TAAGGGGGAAACTCCTTC
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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