The detailed information of tRNA gene sequence


Sequence ID>WENV180076364
Genome IDMPMA02276073
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2115
End posion on genome 2026
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttatgtttc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAAGCGCACGCTTGGAAAGTGTGTATACGGGAGACCGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tattccttaa
Secondary structure (Cloverleaf model)
>WENV180076364	Ser	GGA
                   c      GCCA tattccttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G           | |                 T T
    T       A A G C
      T T A        G     TATACGGGAGACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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