The detailed information of tRNA gene sequence


Sequence ID>WENV180076414
Genome IDMPMA02279197
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 186
End posion on genome 105
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggccaccaaa
tRNA gene sequence 
GCCACTTTGCCCGAGCGGTTAAGGCGTCGGCCTGCTAAGCCGATGGGGTCTCCCCGCGTG
GGTTCGAATCCCACAGGTGTCGttt
Downstream region at tRNA end position 
ttgcgcctgc
Secondary structure (Cloverleaf model)
>WENV180076414	Ser	GCT
                   a      Gttt ttgcgcctgc
                     G - C
                     C   T
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | |                   T T
    T       A G G C
      T A          G     TGGGGTCTCCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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