The detailed information of tRNA gene sequence


Sequence ID>WENV180076467
Genome IDMPMA02283976
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1587
End posion on genome 1513
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
GGGATCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGGTCCCGCtc
Downstream region at tRNA end position 
ctctaaaacc
Secondary structure (Cloverleaf model)
>WENV180076467	Asp	GTC
                   t      GCtc ctctaaaacc
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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