The detailed information of tRNA gene sequence


Sequence ID>WENV180076978
Genome IDMPMB02024004
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 6621
End posion on genome 6716
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgccaatatt
tRNA gene sequence 
GGGGATGATTGCGTGGCTGGTGCCCGCCGCGGTCTTCAACACCGTTGAGACGGCGGAGAG
CCGTTTGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
gaattcaaaa
Secondary structure (Cloverleaf model)
>WENV180076978	SeC	TCA
                   t      GCCA gaattcaaaa
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       T G C G       C T G G G     C
    G         | | |                 T T
    G       C C G C
      T G C        C     TGAGACGGCGGAGAGCCGTTTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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