The detailed information of tRNA gene sequence


Sequence ID>WENV180076983
Genome IDMPMB02024456
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3204
End posion on genome 3116
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctgatttatt
tRNA gene sequence 
GGAGAGATGGCAGAGTCTGGCTGAATGCGCCGCACTCGAAATGCGGTATATCTTTTGGGT
ATCGGGGGTTCGAATCCCTCTCTCTCCGCta
Downstream region at tRNA end position 
accttaaata
Secondary structure (Cloverleaf model)
>WENV180076983	Ser	CGA
                   t      GCta accttaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    C T G A        G     TATATCTTTTGGGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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