The detailed information of tRNA gene sequence


Sequence ID>WENV180077001
Genome IDMPMB02025617
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2240
End posion on genome 2327
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttgatattt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCACGCTTGGAAAGCGTGTGTGCGTTCACGCGTA
CCGCGGGTTCGAATCCCGCCCTCTCCGCtc
Downstream region at tRNA end position 
tcttaagccc
Secondary structure (Cloverleaf model)
>WENV180077001	Ser	GGA
                   t      GCtc tcttaagccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTGCGTTCACGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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