The detailed information of tRNA gene sequence


Sequence ID>WENV180077124
Genome IDMPMB02031398
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 4262
End posion on genome 4170
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catttgacac
tRNA gene sequence 
GGAGAGATGGGTGAGTTGGTTTAAACCAGTCGTTTGCTAAATGACCGTACGTGGAAACAT
GTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gcctctgata
Secondary structure (Cloverleaf model)
>WENV180077124	Ser	GCT
                   c      GCCA gcctctgata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTACGTGGAAACATGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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