The detailed information of tRNA gene sequence


Sequence ID>WENV180077135
Genome IDMPMB02032427
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3285
End posion on genome 3378
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaatatgct
tRNA gene sequence 
GGAGAGGTGTCCGAGCTGGCTGAAGGAGCACGACTGGAAATCGTGTGTGCTGTTTAAAGC
GGCACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaaatcaaa
Secondary structure (Cloverleaf model)
>WENV180077135	Ser	GGA
                   t      GCCA aaaaatcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TGTGCTGTTTAAAGCGGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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