The detailed information of tRNA gene sequence


Sequence ID>WENV180077215
Genome IDMPMB02036473
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 52
End posion on genome 143
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagttcatta
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGTTTAAACCAGTCGTTTGCTAAATGACCGTACGTGGAAACATG
TACCGAGAGTTCGAATCTCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tataaaagtt
Secondary structure (Cloverleaf model)
>WENV180077215	Ser	GCT
                   a      GCCA tataaaagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CGTACGTGGAAACATGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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