The detailed information of tRNA gene sequence


Sequence ID>WENV180077261
Genome IDMPMB02038924
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1425
End posion on genome 1338
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcccccccgg
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGACGATCGGGGCGCTCTCGAAAAGCGTTGTGGCCTTGTGGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
ttcagaatcg
Secondary structure (Cloverleaf model)
>WENV180077261	Ser	CGA
                   g      GCtg ttcagaatcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    A       T C G G
      C G A        G     TGTGGCCTTGTGGTCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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