The detailed information of tRNA gene sequence


Sequence ID>WENV180077286
Genome IDMPMB02040672
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 464
End posion on genome 559
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
actaacttaa
tRNA gene sequence 
GGAGAGTGAAAGGTGGCTGGTGCTCCTCGCGGTCTTCAAAACCGTTGTCGGTTCGTGAAC
GGGCCGAGGTAGGTTCGATTCCTACCCTCTCCGCCA
Downstream region at tRNA end position 
attttccttc
Secondary structure (Cloverleaf model)
>WENV180077286	SeC	TCA
                   a      GCCA attttccttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     C A T C C     A
    C G G T        A      | | | | |     G
  T         G G A A       G T A G G     C
  G         + |   |                 T T
  G         T C C T
    T G C          C     TGTCGGTTCGTGAACGGGCCGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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