The detailed information of tRNA gene sequence


Sequence ID>WENV180077304
Genome IDMPMB02041666
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 217
End posion on genome 124
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgtgcgccta
tRNA gene sequence 
GGAGAGGTGGCCGAGTCCGGTTGAAGGCGCTCCCCTGCTAAGGGAGTAAGGGCCGAAAGG
CTCTTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tgacccccgg
Secondary structure (Cloverleaf model)
>WENV180077304	Ser	GCT
                   a      GCCA tgacccccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAAGGGCCGAAAGGCTCTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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