The detailed information of tRNA gene sequence


Sequence ID>WENV180077387
Genome IDMPMB02046091
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 52407
End posion on genome 52498
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaacacactt
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGTGAGTAACCGGAGATAATC
TGGTTCGAGAGTTCGAATCTCTCCCTCTCCGCta
Downstream region at tRNA end position 
aaaagcttcg
Secondary structure (Cloverleaf model)
>WENV180077387	Ser	GCT
                   t      GCta aaaagcttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G A G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAACCGGAGATAATCTGGTTC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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