The detailed information of tRNA gene sequence


Sequence ID>WENV180077479
Genome IDMPMB02051593
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 434
End posion on genome 345
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actattatat
tRNA gene sequence 
GGAAGAGTGGCAGAGAGGTTTAATGCGGCACACTGCTAATGTGTTTATCTCATCTATGGG
ATACGAAGGTTCGAATCCTTCCTCTTCCGCag
Downstream region at tRNA end position 
taaaaaaaag
Secondary structure (Cloverleaf model)
>WENV180077479	Ser	GCT
                   t      GCag taaaaaaaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T T C C     A
      A G A        G      | | | | |     G
    G       G A C G       G A A G G     C
    G         | | |                 T T
    T       A T G C
      T T A        G     TTATCTCATCTATGGGATAC
                    G + T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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