The detailed information of tRNA gene sequence


Sequence ID>WENV180077566
Genome IDMPMB02057463
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1514
End posion on genome 1440
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttaaaccgat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCATAGGTTCAAA
TCCTATCCCCGCTACtg
Downstream region at tRNA end position 
acgaaagacc
Secondary structure (Cloverleaf model)
>WENV180077566	fMet	CAT
                   t      ACtg acgaaagacc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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