The detailed information of tRNA gene sequence


Sequence ID>WENV180078127
Genome IDMPMB02086881
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 14345
End posion on genome 14256
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcgtcggt
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCCTCCGGGTCA
CCATGGGTTCAAATCCCATACCTTCCGCCA
Downstream region at tRNA end position 
agtcgatgac
Secondary structure (Cloverleaf model)
>WENV180078127	Ser	CGA
                   t      GCCA agtcgatgac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T A C C C     A
      C G A        G      | | | | |     A
    G       G A C C       A T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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