The detailed information of tRNA gene sequence


Sequence ID>WENV180078195
Genome IDMPMB02091287
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 323
End posion on genome 420
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agttgcacat
tRNA gene sequence 
GGGAGCGGATGGGGCCTGGTGGCTCCTGCGGTCTTCAAAACCGTTGGCGGCAACCCTGCG
GTTGGCGCGGTGGGTTCGACTCCCTCTCGCTCCCGCCA
Downstream region at tRNA end position 
cccgtgtgcc
Secondary structure (Cloverleaf model)
>WENV180078195	SeC	TCA
                   t      GCCA cccgtgtgcc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T          T C
                    A     C T C C C     A
      T C C        T      |   | | |     G
    G       G G G G       G T G G G     C
    G       | + | |                 T T
    T       C T C C
      G G          T     TGGCGGCAACCCTGCGGTTGGCGCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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