The detailed information of tRNA gene sequence


Sequence ID>WENV180078327
Genome IDMPMB02098911
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 393
End posion on genome 296
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgaacggaat
tRNA gene sequence 
GGGAATGGATGGGGCACTGGTGGCCCTCGCGGGCTTCAAACCCGTTGCGGTGTGCTAATC
ACACACTGGGTGGGTTCGATTCCCACACATTCCCGCCA
Downstream region at tRNA end position 
atacacttcc
Secondary structure (Cloverleaf model)
>WENV180078327	SeC	TCA
                   t      GCCA atacacttcc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     G   A          T T
                    A     C A C C C     A
      C A C        T      | | | | |     G
    T       G G G G       G T G G G     C
    G       | | | +                 T T
    G       C C C T
      T G G        C     TGCGGTGTGCTAATCACACACTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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