The detailed information of tRNA gene sequence


Sequence ID>WENV180078399
Genome IDMPMB02102870
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 5617
End posion on genome 5712
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gaagtgccat
tRNA gene sequence 
GGAAGCGAACGGGGCCCGGTGGCCCTCCCGGTCTTCAAAATCGGTCGCTCCCCGCTCTGC
GGGGGGGCTGGGTTCGACTCCCAGGCGCTTCCGCCA
Downstream region at tRNA end position 
taacttgttc
Secondary structure (Cloverleaf model)
>WENV180078399	SeC	TCA
                   t      GCCA taacttgttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   G          T C
                    A     G A C C C     A
      C C C        C      | | | | |     G
    G       G G G G       C T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     TCGCTCCCCGCTCTGCGGGGGGG
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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