The detailed information of tRNA gene sequence


Sequence ID>WENV180078436
Genome IDMPMB02104370
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3025
End posion on genome 3117
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcactaccgc
tRNA gene sequence 
GGAGGGGTCGCATAGAGGCCTAGTGCGCCGGTTTGCTAAACCGGTAAGGGGTGTATAACC
CCTTCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
ctttttcacg
Secondary structure (Cloverleaf model)
>WENV180078436	Ser	GCT
                   c      GCCA ctttttcacg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      A G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TAAGGGGTGTATAACCCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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