The detailed information of tRNA gene sequence


Sequence ID>WENV180078684
Genome IDMPMB02119911
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 52
End posion on genome 142
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgctctcc
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTTGAAGGTGCTCGCCTGGAAAGCGTGTGTACGTCAAAAGCGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atatattata
Secondary structure (Cloverleaf model)
>WENV180078684	Ser	GGA
                   c      GCCA atatattata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    T       A G G T
      T G A        G     TGTACGTCAAAAGCGTACC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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