The detailed information of tRNA gene sequence


Sequence ID>WENV180078698
Genome IDMPMB02121003
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 113
End posion on genome 204
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atggtcaccc
tRNA gene sequence 
GGGGAGGTGCCGGAGTGGACGATCGGGGCCGCCTGCTAAGTGGTTGTCGGGGTAAAACTC
GACCGAGGGTTCGAATCCCTCCCTCCCCGCCA
Downstream region at tRNA end position 
gtcctcaata
Secondary structure (Cloverleaf model)
>WENV180078698	Ser	GCT
                   c      GCCA gtcctcaata
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G       + | | |                 T T
    A       T C G G
      C G A        G     TGTCGGGGTAAAACTCGACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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