The detailed information of tRNA gene sequence


Sequence ID>WENV180078957
Genome IDMPMB02135421
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1097
End posion on genome 1002
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gggcgtcctt
tRNA gene sequence 
GGAAGCGAACGGGGCCCGGTGGCCCTCCCGGTCTTCAAAATCGGTCGCTCCCTGCTCAGC
GGGGGGGCTGGGTTCGACTCCCAGGCGCTTCCGCCA
Downstream region at tRNA end position 
tttcaaccgg
Secondary structure (Cloverleaf model)
>WENV180078957	SeC	TCA
                   t      GCCA tttcaaccgg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   G          T C
                    A     G A C C C     A
      C C C        C      | | | | |     G
    G       G G G G       C T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     TCGCTCCCTGCTCAGCGGGGGGG
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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