The detailed information of tRNA gene sequence


Sequence ID>WENV180079290
Genome IDMPMB02152701
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 11885
End posion on genome 11960
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgtcctgat
tRNA gene sequence 
AGGGCAGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAAGGTCGCAGGTTCGACC
CCTGTCTGCCCTGCCA
Downstream region at tRNA end position 
gaaaaaattg
Secondary structure (Cloverleaf model)
>WENV180079290	Trp	CCA
                   t      GCCA gaaaaaattg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          C C
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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