The detailed information of tRNA gene sequence


Sequence ID>WENV180079354
Genome IDMPMB02155932
Search identical group
Phylum/Class[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1354
End posion on genome 1447
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgaaaatgt
tRNA gene sequence 
GGAAGCGTGGGAGAGTCTGGTTTAATCCATTGGTTTGCTAAATCAACATACGGTTAATTC
CGTATCATCCGTTCAAATCGGATCGCTTCCGCCA
Downstream region at tRNA end position 
gaataaatta
Secondary structure (Cloverleaf model)
>WENV180079354	Ser	GCT
                   t      GCCA gaataaatta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T A G G C     A
    C T G A        G      | | | | |     A
  T         G A G G       A T C C G     C
  G           | | |                 T T
  G         A T C C
    T T T A        A     CATACGGTTAATTCCGTATC
                    T - A
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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